PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco021320.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family WRKY
Protein Properties Length: 330aa    MW: 34497 Da    PI: 10.3081
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco021320.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.73.8e-31263320359
                  -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp ++++tYegeH+h+
  Aco021320.1 263 DEYSWRKYGQKPIKGSPYPRGYYKCSTLrGCPARKHVERAPDDPAMLIVTYEGEHRHT 320
                  9************************9988****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105335.9E-20205259IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.3E-32249320IPR003657WRKY domain
PROSITE profilePS5081130.205256322IPR003657WRKY domain
SuperFamilySSF1182902.62E-26259321IPR003657WRKY domain
SMARTSM007741.7E-36261321IPR003657WRKY domain
PfamPF031061.4E-26263319IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MIQEAAAAGI RSVERLIAQI SRQQESAPAP APAPVDCREI ADFTVAKFRK LISVLNRTGH  60
ARFRRGPSAP VEEEDEEEPP LRTLTLAPNP PKPSPSPGKG PATGLALSLD FGKAIGIGAG  120
EESFSISSAN SSFLSSITGD GSVSNGRQGG AASSSSLLFA PPSSASAAAA GKPPLIRGAT  180
ATATASASAA AAGKPPLMSS SPLIKKRCHG HGHGHGHAHA EDVAGKYGVN GGRCHCSKRR  240
KLRVKRTIRV PAISSKVADI PPDEYSWRKY GQKPIKGSPY PRGYYKCSTL RGCPARKHVE  300
RAPDDPAMLI VTYEGEHRHT HDPSHPLNA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A9e-212583191474Probable WRKY transcription factor 4
2lex_A9e-212583191474Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008801524.11e-108PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 17
RefseqXP_010927275.11e-108PREDICTED: probable WRKY transcription factor 11
SwissprotQ9SV151e-92WRK11_ARATH; Probable WRKY transcription factor 11
TrEMBLA0A0B4LB881e-114A0A0B4LB88_9ASPA; WRKY transcription factor
STRINGVIT_04s0069g00920.t012e-99(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP61738171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.17e-79WRKY DNA-binding protein 11